Search results for "interaction [dark matter]"
showing 10 items of 363 documents
Loneliness and interaction ritual theory: failed interaction chains among Finnish university students
2021
This article relates loneliness to interaction ritual theory, understanding loneliness in terms of problematic microinteractional dynamics. The advantage of interaction ritual theory is that it extends our understanding of the issue of the psychologised self and related questions such as how loneliness feels or is experienced. Loneliness is here defined as a response to interaction representing relational understanding of emotions. Interaction ritual theory is interested in the emotional consequences that individuals experience from successful or unsuccessful interaction rituals. Loneliness in this view represents a state in which the individual is denied access to rewarding aspects of inte…
The Biosynthesis of Rare Homo-Amino Acid Containing Variants of Microcystin by a Benthic Cyanobacterium
2019
Microcystins are a family of chemically diverse hepatotoxins produced by distantly related cyanobacteria and are potent inhibitors of eukaryotic protein phosphatases 1 and 2A. Here we provide evidence for the biosynthesis of rare variants of microcystin that contain a selection of homo-amino acids by the benthic cyanobacterium Phormidium sp. LP904c. This strain produces at least 16 microcystin chemical variants many of which contain homophenylalanine or homotyrosine. We retrieved the complete 54.2 kb microcystin (mcy) gene cluster from a draft genome assembly. Analysis of the substrate specificity of McyB1 and McyC adenylation domain binding pockets revealed divergent substrate specificity …
Aneuploid IMR90 cells induced by depletion of pRB, DNMT1 and MAD2 show a common gene expression signature
2019
Chromosome segregation defects lead to aneuploidy which is a major feature of solid tumors. How diploid cells face chromosome mis-segregation and how aneuploidy is tolerated in tumor cells are not completely defined yet. Thus, an important goal of cancer genetics is to identify gene networks that underlie aneuploidy and are involved in its tolerance. To this aim, we induced aneuploidy in IMR90 human primary cells by depleting pRB, DNMT1 and MAD2 and analyzed their gene expression profiles by microarray analysis. Bioinformatic analysis revealed a common gene expression profile of IMR90 cells that became aneuploid. Gene Set Enrichment Analysis (GSEA) also revealed gene-sets/pathways that are …
Interaction with OGG1 Is Required for Efficient Recruitment of XRCC1 to Base Excision Repair and Maintenance of Genetic Stability after Exposure to O…
2015
International audience; XRCC1 is an essential protein required for the maintenance of genomic stability through its implication in DNA repair. The main function of XRCC1 is associated with its role in the single-strand break (SSB) and base excision repair (BER) pathways that share several enzymatic steps. We show here that the polymorphic XRCC1 variant R194W presents a defect in its interaction with the DNA glycosylase OGG1 after oxidative stress. While proficient for single-strand break repair (SSBR), this variant does not colocalize with OGG1, reflecting a defect in its involvement in BER. Consistent with a role of XRCC1 in the coordination of the BER pathway, induction of oxidative base …
A knowledge-based decision support system in bioinformatics: An application to protein complex extraction
2013
Abstract Background We introduce a Knowledge-based Decision Support System (KDSS) in order to face the Protein Complex Extraction issue. Using a Knowledge Base (KB) coding the expertise about the proposed scenario, our KDSS is able to suggest both strategies and tools, according to the features of input dataset. Our system provides a navigable workflow for the current experiment and furthermore it offers support in the configuration and running of every processing component of that workflow. This last feature makes our system a crossover between classical DSS and Workflow Management Systems. Results We briefly present the KDSS' architecture and basic concepts used in the design of the knowl…
Convergence of density-matrix expansions for nuclear interactions
2010
We extend density-matrix expansions in nuclei to higher orders in derivatives of densities and test their convergence properties. The expansions allow for converting the interaction energies characteristic to finite- and short-range nuclear effective forces into quasi-local density functionals. We also propose a new type of expansion that has excellent convergence properties when benchmarked against the binding energies obtained for the Gogny interaction.
Essay on the integration of interactions in the treatment effect evaluation : the contribution of spatial econometrics methods
2015
This thesis focuses on the integration of interactions in the estimation of the public policy’s effect. Indeed, the estimation standard methods usually rely on strong assumptions that exclude partially or completely the interaction effect both in the selection process of beneficiaries and in the performance of the policy. However, the validity of these assumptions is questionable, particularly in the context of a non-experimental policy because an individual according as it is the beneficiary or not the policy, is not isolated: he interacts with his neighborhood. Thus, the estimated effect of the policy by traditional methods is likely to be biased (underestimation or overestimation) theref…
Quantum field theory of dilute homogeneous Bose-Fermi mixtures at zero temperature: General formalism and beyond mean-field corrections
2002
We consider a dilute homogeneous mixture of bosons and spin-polarized fermions at zero temperature. We first construct the formal scheme for carrying out systematic perturbation theory in terms of single particle Green's functions. We introduce a new relevant object, the renormalized boson-fermion T-matrix which we determine to second order in the boson-fermion s-wave scattering length. We also discuss how to incorporate the usual boson-boson T-matrix in mean-field approximation to obtain the total ground state properties of the system. The next order term beyond mean-field stems from the boson-fermion interaction and is proportional to $a_{\scriptsize BF}k_{\scriptsize F}$. The total groun…
Resonance Dipole-Dipole Interaction Between Two Accelerated Atoms in the Presence of a Reflecting Plane Boundary
2018
We study the resonant dipole-dipole interaction energy between two uniformly accelerated identical atoms, one excited and the other in the ground state, prepared in a correlated {\em Bell-type} state, and interacting with the scalar field or the electromagnetic field nearby a perfectly reflecting plate. We suppose the two atoms moving with the same uniform acceleration, parallel to the plane boundary, and that their separation is constant during the motion. We separate the contributions of vacuum fluctuations and radiation reaction field to the resonance energy shift of the two-atom system, and show that Unruh thermal fluctuations do not affect the resonance interaction, which is exclusivel…
Van der Waals and resonance interactions between accelerated atoms in vacuum and the Unruh effect
2017
We discuss different physical effects related to the uniform acceleration of atoms in vacuum, in the framework of quantum electrodynamics. We first investigate the van der Waals/Casimir-Polder dispersion and resonance interactions between two uniformly accelerated atoms in vacuum. We show that the atomic acceleration significantly affects the van der Waals force, yielding a different scaling of the interaction with the interatomic distance and an explicit time dependence of the interaction energy. We argue how these results could allow for an indirect detection of the Unruh effect through dispersion interactions between atoms. We then consider the resonance interaction between two accelerat…